DNA Binding Motif

						

			
Accessions: M0282 (AthalianaCistrome v4_May2016)

			
Names: GATA20.ampDAP, T07368;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 13
Consensus: tyGATCkGATyad
Weblogo: 
PSSM: P0      A      C      G      T
01     78    142     75    305      t
02    147    156    145    152      y
03     24      0    576      0      G
04    599      0      1      0      A
05      0      0      0    600      T
06      0    560     13     27      C
07    112    126    195    167      k
08     62     42    469     27      G
09    445     29     84     42      A
10     74     15     19    492      T
11     43    218     94    245      y
12    194    123    142    141      a
13    166     69    191    174      d
Binding TFs: T07368 (GATA zinc finger)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.