DNA Binding Motif

						

			
Accessions: HOXB2_ELF1_2_3_4_5 (HumanTF2 1.0)

			
Names: HOXB2_ELF1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 18
Consensus: TrAtkrswrsmGGAAGtr
Weblogo: 
PSSM: P0      A      C      G      T
01    139     69     75    759      T
02    759     70    361    180      r
03    759      7     25      1      A
04     69    157    144    759      t
05     97    169    465    294      k
06    312    146    447    163      r
07    168    232    204    156      s
08    266    107    172    214      w
09    209    179    195    177      r
10    183    221    255    100      s
11    236    393    109     21      m
12      4      6    759      0      G
13      0      0    759     19      G
14    759      7      0     45      A
15    759     21      1     95      A
16    161    107    759     15      G
17    205    360    230    759      t
18    201    133    297    129      r
Type: Heterodimer
Binding TFs: ELF1_TF2 (Ets-domain, Transcription factor protein N terminal)
HOXB2_TF1 (Homeobox domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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