DNA Binding Motif
| Accessions: | 4u0y_B (3D-footprint 20231221) |
| Names: | HTH-type transcriptional repressor YvoA |
| Organisms: | Bacillus subtilis, strain 168 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | Crystal structure of the DNA-binding domains of YvoA in complex with palindromic operator DNA |
| Length: | 7 |
| Consensus: | TGGyaTA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1 0 22 73 T 02 0 0 96 0 G 03 0 0 96 0 G 04 4 41 1 50 y 05 39 22 22 13 a 06 4 2 4 86 T 07 96 0 0 0 A |
| Binding TFs: | 4u0y_B (Bacterial regulatory proteins, gntR family, DeoR-like helix-turn-helix domain) |
| Binding Sites: | 4u0y_E / 4u0y_F |
| Publications: | Fillenberg S.B, Grau F.C, Seidel G, Muller Y.A. Structural insight into operator dre-sites recognition and effector binding in the GntR/HutC transcription regulator NagR. Nucleic acids research 43:1283-96 (2015). [Pubmed] |
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