DNA Binding Motif

						

			
Accessions: RFX3_DBD_2 (HumanTF 1.0)

			
Names: RFX3
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3
Length: 15
Consensus: cGTTGCTArGCAACs
Weblogo: 
PSSM: P0      A      C      G      T
01    129   1245    510    443      c
02      7      0   2230     94      G
03      2      6      3   2102      T
04     35     81      5   2051      T
05    137     66   2113     20      G
06      1   2463      4      0      C
07      1    164      1   1943      T
08   2143      5      8      0      A
09    832     90   1107     92      r
10      0      0   2201      1      G
11     99   2205    126    261      C
12   2124     12    104    106      A
13   2169      6     23      2      A
14     85   2475      0     39      C
15    236    844    824    201      s
Binding TFs: RFX3_DBD (RFX DNA-binding domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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