DNA Binding Motif

						

			
Accessions: MA1646.2 (JASPAR 2024)

			
Names: OSR2
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 8
Consensus: aCAGAAGC
Weblogo: 
PSSM: P0      A      C      G      T
01   8520   2221   2117   1950      a
02    254  13937    406    211      C
03  13599    197    737    275      A
04    216    229  14206    157      G
05  11678    703    901   1526      A
06  13725    288    516    279      A
07    416    170  13982    240      G
08    666  12109    841   1192      C
Type: Heterodimer
Binding TFs: Q8N2R0 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q8N2R0
Binding Sites: MA1646.2.12 / MA1646.2.7
MA1646.2.9
MA1646.2.1
MA1646.2.10
MA1646.2.11 / MA1646.2.4
MA1646.2.13
MA1646.2.14
MA1646.2.15 / MA1646.2.17
MA1646.2.16
MA1646.2.18
MA1646.2.19 / MA1646.2.20
MA1646.2.2
MA1646.2.3
MA1646.2.5
MA1646.2.6
MA1646.2.8
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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