DNA Binding Motif

						

			
Accessions: 3fhz_AD (3D-footprint 20231221)

			
Names: Arginine repressor
Organisms: Mycobacterium tuberculosis, strain ATCC 25618 / H37Rv
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of the arginine repressor from Mycobacterium tuberculosis bound with its DNA operator and co-repressor, L-arginine
Length: 14
Consensus: TGCATAnngATTMA
Weblogo: 
PSSM: P0      A      C      G      T
01     13      6     10     67      T
02      0      0     96      0      G
03      0     96      0      0      C
04     85      5      3      3      A
05      0      0      0     96      T
06     92      3      0      1      A
07     24     24     24     24      n
08     24     24     24     24      n
09     10     15     61     10      g
10     96      0      0      0      A
11      3      6      6     81      T
12      3      6     13     74      T
13     72     24      0      0      M
14     96      0      0      0      A
Type: Heterodimer
Binding TFs: 3fhz_A (Arginine repressor, DNA binding domain, Arginine repressor, C-terminal domain)
3fhz_D (Arginine repressor, DNA binding domain, Arginine repressor, C-terminal domain)
Binding Sites: 3fhz_K
3fhz_L
			
Publications: Cherney L.T, Cherney M.M, Garen C.R, James M.N. The structure of the arginine repressor from Mycobacterium tuberculosis bound with its DNA operator and Co-repressor, L-arginine. Journal of molecular biology 388:85-97 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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