DNA Binding Motif

						

			
Accessions: MAFA_4 (HT-SELEX2 May2017)

			
Names: MAFA
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 13
Consensus: aawwdTGCTGACd
Weblogo: 
PSSM: P0      A      C      G      T
01  11640   4374   6486   5512      a
02  19587   1597   5267   8426      a
03  15673    623    984  12340      w
04  13708   2260   1386  14305      w
05   7052   6054   7587   7320      d
06    764   4723    104  28013      T
07      0      0  28013      0      G
08    868  28013      0     47      C
09      0     34      0  28013      T
10     20      0  28013    912      G
11  28013      0      0      0      A
12    216  28013   1138   3313      C
13   7415   2506  10398   7695      d
Binding TFs: MAFA (bZIP Maf transcription factor)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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