DNA Binding Motif

Accessions: POU3F2_9 (HT-SELEX2 May2017)
Names: POU3F2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: wtATGCrCATaa
Weblogo:
PSSM: P0 A C G T
01 89 9 65 125 w
02 122 96 81 289 t
03 289 7 37 18 A
04 18 33 5 289 T
05 21 15 289 15 G
06 0 289 8 88 C
07 133 15 289 12 r
08 0 289 0 13 C
09 289 14 0 17 A
10 0 37 10 289 T
11 289 33 75 78 a
12 146 68 11 64 a
Binding TFs: POU3F2 (Homeobox domain, Pou domain - N-terminal to homeobox domain)
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.