DNA Binding Motif

						

			
Accessions: EEAD0138 (EEADannot 2025-01-07)

			
Names: LFY-UFO-dLUBS
Organisms: Arabidopsis thaliana
Libraries: EEADannot 2025-01-07 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Length: 25
Consensus: rrwaCAyyswwwtrycyrdwrgdya
Weblogo: 
PSSM: P0      A      C      G      T
01    180     13    387      0      r
02    244     42    249     45      r
03    177     62    105    236      w
04    328     24    141     87      a
05      0    573      0      7      C
06    521     27      6     26      A
07     47    180     92    261      y
08     73    209     86    212      y
09    114    191    169    106      s
10    192     94     74    220      w
11    306     28     10    236      w
12    174     31     54    321      w
13    140     12     69    359      t
14    391      7    154     28      r
15    137    150     28    265      y
16    140    370      2     68      c
17     12    375      2    191      y
18    315     23    159     83      r
19    182     95    149    154      d
20    146    127     34    273      w
21    244     18    299     19      r
22    130      5    322    123      g
23    236     32    160    152      d
24     71    145     34    330      y
25    312     99     25    144      a
Binding TFs: LEAFY (Floricaula / Leafy protein)
			
Publications: Rieu P, Turchi L, Thevenon E, Zarkadas E, Nanao M, Chahtane H, Tichtinsky G, Lucas J, Blanc-Mathieu R, Zubieta C, Schoehn G, Parcy F. The F-box protein UFO controls flower development by redirecting the master transcription factor LEAFY to new cis-elements. Nat Plants 9:315-329 (2023). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.