DNA Binding Motif

						

			
Accessions: MA0039.3 (JASPAR 2024)

			
Names: KLF4
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 11
Consensus: mcACACCCwsc
Weblogo: 
PSSM: P0      A      C      G      T
01    262    481    126    100      m
02    117    648    105     99      c
03    924     14     18     13      A
04      8    948      6      7      C
05    830      2    123     14      A
06     13    914     18     24      C
07     29    909     17     14      C
08     15    933      4     17      C
09    259     72     39    599      w
10    184    279    283    223      s
11    230    295    202    242      c
Type: Heterodimer
Binding TFs: O43474 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
O43474
Binding Sites: MA0039.3.1
MA0039.3.10
MA0039.3.11
MA0039.3.12
MA0039.3.13
MA0039.3.14
MA0039.3.15
MA0039.3.16
MA0039.3.17
MA0039.3.18
MA0039.3.19
MA0039.3.2
MA0039.3.20
MA0039.3.3
MA0039.3.4
MA0039.3.5
MA0039.3.6
MA0039.3.7
MA0039.3.8
MA0039.3.9
			
Publications: Chen X, Xu H, Yuan P, Fang F, Huss M, Vega V.B, Wong E, Orlov Y.L, Zhang W, Jiang J, Loh Y.H, Yeo H.C, Yeo Z.X, Narang V, Govindarajan K.R, Leong B, Shahab A, Ruan Y, Bourque G, Sung W.K, Clarke N.D, Wei C.L, Ng H.H. Integration of external signaling pathways with the core transcriptional network in embryonic stem cells. Cell 133:1106-17 (2008). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.