DNA Binding Motif
| Accessions: | MA1664.2 (JASPAR 2024) |
| Names: | HSFA6B |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 12 |
| Consensus: | kcTTCTrGAAgc |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 205 245 413 293 k 02 228 412 234 282 c 03 47 44 14 1051 T 04 15 18 9 1114 T 05 13 1108 20 15 C 06 27 50 16 1063 T 07 366 78 660 52 r 08 14 11 1121 10 G 09 1114 7 12 23 A 10 1044 15 40 57 A 11 268 259 364 265 g 12 287 397 238 234 c |
| Type: | Heterodimer |
| Binding TFs: | Q9LUH8 (HSF-type DNA-binding) Q9LUH8 |
| Binding Sites: | MA1664.2.7 / MA1664.2.8 MA1664.2.2 MA1664.2.3 MA1664.2.4 MA1664.2.5 MA1664.2.6 MA1664.2.1 MA1664.2.10 / MA1664.2.18 MA1664.2.11 MA1664.2.12 MA1664.2.13 MA1664.2.14 MA1664.2.15 MA1664.2.16 MA1664.2.17 / MA1664.2.9 MA1664.2.19 MA1664.2.20 |
| Publications: | Huang YC, Niu CY, Yang CR, Jinn TL. The Heat Stress Factor HSFA6b Connects ABA Signaling and ABA-Mediated Heat Responses. Plant Physiol 172:1182-1199 (2016). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.