DNA Binding Motif
| Accessions: | MA2015.1 (JASPAR 2024) |
| Names: | NAC002 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 13 |
| Consensus: | wwyACGcAACTww |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 346 237 229 357 w 02 501 152 185 331 w 03 175 531 115 348 y 04 1143 12 3 11 A 05 31 1096 14 28 C 06 38 13 1089 29 G 07 47 753 103 266 c 08 1066 58 13 32 A 09 1070 16 16 67 A 10 26 1013 64 66 C 11 69 144 63 893 T 12 293 243 232 401 w 13 387 259 195 328 w |
| Type: | Heterodimer |
| Binding TFs: | Q39013 (No apical meristem (NAM) protein) Q39013 |
| Binding Sites: | MA2015.1.1 MA2015.1.7 MA2015.1.14 MA2015.1.19 MA2015.1.10 MA2015.1.11 MA2015.1.12 MA2015.1.13 MA2015.1.15 MA2015.1.16 MA2015.1.17 MA2015.1.18 MA2015.1.2 MA2015.1.20 MA2015.1.3 MA2015.1.4 MA2015.1.5 MA2015.1.6 MA2015.1.8 MA2015.1.9 |
| Publications: | Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). [Pubmed] |
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