DNA Binding Motif

						

			
Accessions: TGIF2LY_methyl_1 (HT-SELEX2 May2017)

			
Names: TGIF2LY
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: tGACAgsTGTCa
Weblogo: 
PSSM: P0      A      C      G      T
01    222    710    170   1933      t
02     50     79   1933     52      G
03   1933     51    128    386      A
04     27   1933     28     73      C
05   1933     23    270     60      A
06     29    457   1076    370      g
07    360   1023    525     24      s
08     50    305     19   1933      T
09     63     42   1933     43      G
10    355    151     56   1933      T
11     38   1933     86     56      C
12   1933    147    736    219      a
Binding TFs: TGIF2LY (Homeobox domain, Homeobox KN domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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