DNA Binding Motif
| Accessions: | MA1120.2 (JASPAR 2024) |
| Names: | SOX13 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 7 |
| Consensus: | ACAATGg |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 4451 22 40 39 A 02 55 4276 60 161 C 03 4329 55 50 118 A 04 4390 48 63 51 A 05 156 77 28 4291 T 06 585 57 3837 73 G 07 778 647 2666 461 g |
| Type: | Heterodimer |
| Binding TFs: | Q9UN79 (HMG (high mobility group) box, Domain of unknown function (DUF1898)) Q9UN79 |
| Binding Sites: | MA1120.2.3 MA1120.2.13 MA1120.2.12 / MA1120.2.16 / MA1120.2.17 / MA1120.2.4 / MA1120.2.8 MA1120.2.19 / MA1120.2.20 / MA1120.2.6 MA1120.2.11 / MA1120.2.2 MA1120.2.5 MA1120.2.18 / MA1120.2.7 MA1120.2.9 MA1120.2.1 MA1120.2.10 / MA1120.2.14 MA1120.2.15 |
| Publications: | Hou L, Srivastava Y, Jauch R. Molecular basis for the genome engagement by Sox proteins. Semin Cell Dev Biol : (2017). [Pubmed] |
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