DNA Binding Motif

						

			
Accessions: UN0206.2 (JASPAR 2024)

			
Names: ZNF580
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 19
Consensus: rTTATGTTAAATwrTTACC
Weblogo: 
PSSM: P0      A      C      G      T
01   1789    237   1822    176      r
02      3      0      0   3888      T
03      1      0      0   3888      T
04   3888      0      0      1      A
05      0     58      0   3848      T
06      0      1   3889      0      G
07      0      0    125   3789      T
08     22      3      2   3878      T
09   3559    261     31    236      A
10   3888      0      2      0      A
11   3862      0     23     11      A
12    469     20     45   3364      T
13   1872     45    230   1824      w
14   2284    180    981    443      r
15    273    720     59   2988      T
16     87      0      0   3820      T
17   3888      0      2      1      A
18      0   3835      0     98      C
19      0   3888      0      0      C
Type: Heterodimer
Binding TFs: Q9UK33 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Q9UK33
			
	
			


			

				

				
				
				
				

			

			

		

	
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