DNA Binding Motif

						

			
Accessions: M0629 (AthalianaCistrome v4_May2016)

			
Names: SND3.DAP, T02284;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: wrCkTrwdgawsAMG
Weblogo: 
PSSM: P0      A      C      G      T
01    320     10     79    189      w
02    204     18    353     23      r
03     24    564      0     10      C
04      0      0    388    210      k
05      0      0      0    598      T
06    160     68    370      0      r
07    251     53     24    270      w
08    159    123    164    152      d
09     94    131    277     96      g
10    198    129    144    127      a
11    301     28     76    193      w
12     13    307    222     56      s
13    598      0      0      0      A
14    419    179      0      0      M
15      0      0    595      3      G
Binding TFs: T02284 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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