DNA Binding Motif

						

			
Accessions: M0672 (AthalianaCistrome v4_May2016)

			
Names: ANAC062.ampDAP, T12080;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 18
Consensus: CTTmaycabyAAGtaWyy
Weblogo: 
PSSM: P0      A      C      G      T
01      0    597      0      0      C
02      0      0      1    596      T
03      0      0      0    597      T
04    274    265     48     10      m
05    255     84    122    136      a
06     78    174     70    275      y
07     93    269     96    139      c
08    201    130    138    128      a
09     56    193    193    155      b
10     17    172     44    364      y
11    597      0      0      0      A
12    597      0      0      0      A
13      0      0    596      1      G
14    143    116    105    233      t
15    390     55     16    136      a
16    414      4      4    175      W
17    126    186     52    233      y
18    142    218     87    150      y
Binding TFs: T12080 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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