DNA Binding Motif

						

			
Accessions: 3clc_B (3D-footprint 20231221)

			
Names: Regulatory protein
Organisms: Enterobacter sp. RFL1396
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal Structure of the Restriction-Modification Controller Protein C.Esp1396I Tetramer in Complex with its Natural 35 Base-Pair Operator
Length: 5
Consensus: CGgac
Weblogo: 
PSSM: P0      A      C      G      T
01      0     96      0      0      C
02      4      7     81      4      G
03     12     12     60     12      g
04     33     21     21     21      a
05     14     52     14     16      c
Binding TFs: 3clc_B (Helix-turn-helix, Helix-turn-helix domain)
Binding Sites: 3clc_E
3clc_F
			
Publications: McGeehan J.E, Streeter S.D, Thresh S.J, Ball N, Ravelli R.B, Kneale G.G. Structural analysis of the genetic switch that regulates the expression of restriction-modification genes. Nucleic acids research 36:4778-87 (2008). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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