DNA Binding Motif

						

			
Accessions: ELK1_TBX21_1 (HumanTF2 1.0)

			
Names: ELK1_TBX21
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 31
Consensus: aaGGtGtgrmrkkkmkttmrCrcCGGAAGyg
Weblogo: 
PSSM: P0      A      C      G      T
01   1668    380    883    832      a
02   2840    391    780    195      a
03    311    336   2799    403      G
04    192    170   2859    207      G
05    330    907    374   2787      t
06    140     94   2780    159      G
07    774   1147    899   3062      t
08    264    688   1664    274      g
09   1721    115    818    236      r
10   1023    898    319    650      m
11    758    635    944    554      r
12    582    610    769    930      k
13    709    469    986    727      k
14    453    325   1191    923      k
15    757   1006    560    567      m
16    459    690    932    811      k
17    615    633    664    979      t
18    275    525    199   1892      t
19   1325    871    607     88      m
20   1359    247    841    444      r
21     99   2657     79     55      C
22   1941     44    899      6      r
23    483   1739    626     43      c
24    295   2792     21     15      C
25      0     11   2893      0      G
26      0      3   2887     21      G
27   2885     13      0     21      A
28   2769     31     42    347      A
29    508    298   2650     18      G
30    427   1093    586   1772      y
31    462    333   1613    483      g
Type: Heterodimer
Binding TFs: ELK1_TF2 (Ets-domain)
ELK1_Full (Ets-domain)
TBX21_TF2 (T-box)
ELK1_TF1 (Ets-domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.