DNA Binding Motif

						

			
Accessions: NKX2-8_4 (HT-SELEX2 May2017)

			
Names: NKX2-8
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: rsCACTYgAv
Weblogo: 
PSSM: P0      A      C      G      T
01   3027   1902   2134   1054      r
02   1356   4346   2260    155      s
03      0   8117      0   1260      C
04   8117      0      0    118      A
05     73   8117      0      0      C
06      0      0     95   8117      T
07      0   3132      0   8117      Y
08   1604   2415   5702     90      g
09   8117    215    410    646      A
10   2573   2144   2796    603      v
Binding TFs: NKX2-8 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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