DNA Binding Motif
| Accessions: | UN0382.1 (JASPAR 2024), MA2053.1 (JASPAR 2024) |
| Names: | NAC105 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 13 |
| Consensus: | hwcAAGCAACcww |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 333 313 166 389 h 02 389 209 257 346 w 03 128 680 214 179 c 04 1178 10 5 8 A 05 1122 69 3 7 A 06 9 12 1176 4 G 07 73 990 37 101 C 08 1136 20 14 31 A 09 1172 4 2 23 A 10 107 825 87 182 C 11 239 699 108 155 c 12 331 180 205 485 w 13 390 297 186 328 w |
| Type: | Heterodimer |
| Binding TFs: | Q9FH59 (No apical meristem (NAM) protein) Q9FH59 |
| Binding Sites: | UN0382.1.2 MA2053.1.6 / UN0382.1.9 MA2053.1.9 / UN0382.1.12 MA2053.1.2 / UN0382.1.3 MA2053.1.3 / UN0382.1.4 MA2053.1.4 / UN0382.1.5 MA2053.1.7 / UN0382.1.10 MA2053.1.8 / UN0382.1.11 UN0382.1.7 MA2053.1.1 / UN0382.1.1 MA2053.1.10 / UN0382.1.13 MA2053.1.11 / UN0382.1.14 MA2053.1.12 / UN0382.1.15 MA2053.1.13 / UN0382.1.16 MA2053.1.14 / UN0382.1.17 MA2053.1.15 / UN0382.1.18 MA2053.1.16 / UN0382.1.19 MA2053.1.17 / UN0382.1.20 UN0382.1.6 MA2053.1.5 / UN0382.1.8 MA2053.1.18 MA2053.1.19 MA2053.1.20 |
| Publications: | Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.