DNA Binding Motif

						

			
Accessions: ZIC1_2 (HT-SELEX2 May2017)

			
Names: ZIC1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 15
Consensus: gaCCCCCYGYtGyGc
Weblogo: 
PSSM: P0      A      C      G      T
01    494   2418   4891   2348      g
02   6961   2456   2517      0      a
03    381   9987      0    173      C
04    216  10026     96    165      C
05   2292   7531    368    387      C
06      0  10151      0      0      C
07    279  10112     32     20      C
08     34   8951     25   3381      Y
09   2375     17   9142      0      G
10      0   8795    133   3307      Y
11   1770   2795   1087   6337      t
12    282      0   9997      0      G
13   1688   5665    461   3947      y
14     12    944   9439   1366      G
15   2393   5273    368   2117      c
Binding TFs: ZIC1 (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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