DNA Binding Motif
| Accessions: | MA2432.1 (JASPAR 2024) |
| Names: | SPL15B |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 7 |
| Consensus: | TAAACTA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 6395 4075 3152 79250 T 02 78431 3959 6861 3621 A 03 77520 6870 2679 5803 A 04 84315 2797 2681 3079 A 05 6339 78562 3751 4220 C 06 5289 3650 3093 80840 T 07 82116 3054 3051 4651 A |
| Binding Sites: | MA2432.1.1 / MA2432.1.11 MA2432.1.10 / MA2432.1.16 / MA2432.1.3 / MA2432.1.6 MA2432.1.12 MA2432.1.13 MA2432.1.14 / MA2432.1.20 MA2432.1.15 MA2432.1.17 / MA2432.1.19 / MA2432.1.9 MA2432.1.18 / MA2432.1.4 MA2432.1.2 / MA2432.1.5 MA2432.1.7 MA2432.1.8 |
| Publications: | Yamasaki K, Kigawa T, Inoue M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Tomo Y, Terada T, Shirouzu M, Tanaka A, Seki M, Shinozaki K, Yokoyama S. An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure. FEBS Lett 580:2109-16 (2006). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.