DNA Binding Motif
Accessions: | MA1882.2 (JASPAR 2024) |
Names: | Hnf1 |
Organisms: | Ciona intestinalis |
Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
Notes: | SELEX |
Length: | 7 |
Consensus: | tTAATTr |
Weblogo: | |
PSSM: | P0 A C G T 01 102 170 121 607 t 02 29 32 8 931 T 03 946 16 22 16 A 04 942 13 27 18 A 05 24 35 24 916 T 06 38 29 55 878 T 07 540 68 254 138 r |
Type: | Heterodimer |
Binding TFs: | Q4H3D7 (Homeobox domain, Hepatocyte nuclear factor 1 (HNF-1), N terminus) Q4H3D7 |
Publications: | José-Edwards DS, Oda-Ishii I, Kugler JE, Passamaneck YJ, Katikala L, Nibu Y, Di Gregorio A. Brachyury, Foxa2 and the cis-Regulatory Origins of the Notochord. PLoS Genet : (2015). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.