DNA Binding Motif

						

			
Accessions: 4nhj_A (3D-footprint 20231221)

			
Names: DNA-binding transcriptional regulator RstA
Organisms: Klebsiella pneumoniae subsp. pneumoniae, strain ATCC 700721 / MGH 78578
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of Klebsiella pneumoniae RstA DNA-binding domain in complex with RstA box
Length: 9
Consensus: GAaTGTACA
Weblogo: 
PSSM: P0      A      C      G      T
01      6      6     78      6      G
02     70     12      0     14      A
03     64     14      6     12      a
04      0      0      0     96      T
05      0      0     96      0      G
06      0      0      0     96      T
07     76      6      6      8      A
08      0     96      0      0      C
09     96      0      0      0      A
Binding TFs: 4nhj_A (Transcriptional regulatory protein, C terminal)
Binding Sites: 4nhj_C
4nhj_D
			
Publications: Li Y.C, Chang C.K, Chang C.F, Cheng Y.H, Fang P.J, Yu T, Chen S.C, Li Y.C, Hsiao C.D, Huang T.H. Structural dynamics of the two-component response regulator RstA in recognition of promoter DNA element. Nucleic acids research 42:8777-88 (2014). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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