DNA Binding Motif

						

			
Accessions: HSFY2_DBD_3 (HumanTF 1.0)

			
Names: HSFY2
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimer of dimers; SELEX cycle: 3
Length: 15
Consensus: tTCGAaysrTTCGAa
Weblogo: 
PSSM: P0      A      C      G      T
01    359    208    266   1526      t
02    203    119    151   1624      T
03    224   1399    206     39      C
04     49    165   1526    208      G
05   1027     60     54     68      A
06    969    137    115    329      a
07    343    443    212    393      y
08    181    575    523    183      s
09    457    137    583    192      r
10    305    192     88   1429      T
11     84     48     58   1580      T
12    136   1391    102     17      C
13     11    251   1464    310      G
14   1034    118     60     96      A
15    959    235    124    303      a
Binding TFs: HSFY2_DBD (HSF-type DNA-binding)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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