DNA Binding Motif

Accessions: MA1748.1 (JASPAR 2024)
Names: DREB1F
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 9
Consensus: yrCCGACat
Weblogo:
PSSM: P0 A C G T
01 188.9 273 235 302 y
02 259 68 638 35 r
03 3.26 767 7.41 222.04 C
04 0.2299 982 14 3.74 C
05 3.63 1.31 992.76 2.29 G
06 962 19 4.09 15 A
07 20 970 9.19 0.12 C
08 527 149 168 155.49 a
09 148 148 130 573 t
Type: Heterodimer
Binding TFs: Q9LN86 (AP2 domain)
Q9LN86
Publications: Magome H, Yamaguchi S, Hanada A, Kamiya Y, Oda K. The DDF1 transcriptional activator upregulates expression of a gibberellin-deactivating gene, GA2ox7, under high-salinity stress in Arabidopsis. Plant J 56:613-26 (2008). [Pubmed]

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