DNA Binding Motif

						

			
Accessions: HOXC13_methyl_1 (HT-SELEX2 May2017)

			
Names: HOXC13
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: gCTCGTAAAAc
Weblogo: 
PSSM: P0      A      C      G      T
01   6706  11800  28707   7670      g
02   1576  54884   2975      0      C
03      0      0      0  54884      T
04      0  54884      6      0      C
05      0     32  54884     30      G
06     16      0     72  54884      T
07  54884      0      1     22      A
08  54884      0     19      0      A
09  54884      0      0      0      A
10  54884   6314   1301   6722      A
11  12023  24959   4250  13652      c
Binding TFs: HOXC13 (Homeobox domain, Hox protein A13 N terminal)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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