DNA Binding Motif

						

			
Accessions: M0101 (AthalianaCistrome v4_May2016)

			
Names: ERF5.ampDAP, T21856;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 21
Consensus: cckcCGCCGCCrymrccrccg
Weblogo: 
PSSM: P0      A      C      G      T
01     87    279     89    112      c
02    103    299     35    130      c
03    124     70    192    181      k
04     27    328    108    104      c
05    103    451     11      2      C
06      6      0    557      4      G
07      1    557      9      0      C
08      0    567      0      0      C
09     10      0    555      2      G
10      2    508      4     53      C
11      0    566      0      1      C
12    233      1    292     41      r
13     58    302     38    169      y
14    145    226     56    140      m
15    194     44    208    121      r
16    105    277     72    113      c
17    124    271     40    132      c
18    147     60    234    126      r
19     87    255    100    125      c
20    105    277     72    113      c
21    112    108    250     97      g
Binding TFs: T21856 (AP2 domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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