DNA Binding Motif
| Accessions: | 1jj4_B (3D-footprint 20231221) |
| Names: | Regulatory protein E2 |
| Organisms: | Human papillomavirus type 18 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | Human papillomavirus type 18 E2 DNA-binding domain bound to its DNA target |
| Length: | 6 |
| Consensus: | CGGTtG |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 10 69 0 17 C 02 0 0 96 0 G 03 0 0 87 9 G 04 0 0 0 96 T 05 19 8 8 61 t 06 11 8 69 8 G |
| Binding TFs: | 1jj4_B (E2 (early) protein, C terminal) |
| Binding Sites: | 1jj4_C / 1jj4_D |
| Publications: | Kim S.S, Tam J.K, Wang A.F, Hegde R.S. The structural basis of DNA target discrimination by papillomavirus E2 proteins. The Journal of biological chemistry 275:31245-54 (2000). [Pubmed] |
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