DNA Binding Motif

Accessions: M0696 (AthalianaCistrome v4_May2016)
Names: ANAC092.DAP, T21729;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: CkTGtavmACAmGyw
Weblogo:
PSSM: P0 A C G T
01 9 581 0 0 C
02 1 0 359 230 k
03 1 0 0 589 T
04 122 5 462 1 G
05 115 126 47 302 t
06 208 128 147 107 a
07 174 156 166 94 v
08 229 159 92 110 m
09 405 27 77 81 A
10 5 422 102 61 C
11 590 0 0 0 A
12 327 263 0 0 m
13 2 0 574 14 G
14 59 256 38 237 y
15 396 39 0 155 w
Binding TFs: T21729 (No apical meristem (NAM) protein)
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

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