DNA Binding Motif
Accessions: | MA0316.1 (JASPAR 2024) |
Names: | HAP5 |
Organisms: | Saccharomyces cerevisiae |
Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
Notes: | COMPILED |
Length: | 15 |
Consensus: | tssgmkCTsATTGGy |
Weblogo: | |
PSSM: | P0 A C G T 01 641 935 1033 1789 t 02 200 1914 2108 97 s 03 113 1513 2485 433 s 04 826 1137 2155 453 g 05 1817 1451 440 1002 m 06 127 637 1273 2389 k 07 98 3199 677 624 C 08 0 700 0 3713 T 09 537 1308 1904 793 s 10 4156 0 0 0 A 11 0 0 0 4156 T 12 0 0 234 3922 T 13 387 0 3788 0 G 14 361 497 3123 262 G 15 0 1730 0 2808 y |
Type: | Heterodimer |
Binding TFs: | Q02516 (Core histone H2A/H2B/H3/H4, Histone-like transcription factor (CBF/NF-Y) and archaeal histone) Q02516 |
Publications: | Pachkov M, Erb I, Molina N, van Nimwegen E. SwissRegulon: a database of genome-wide annotations of regulatory sites. Nucleic acids research 35:D127-31 (2007). [Pubmed] |
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