DNA Binding Motif

						

			
Accessions: ZIC4_methyl_1 (HT-SELEX2 May2017)

			
Names: ZIC4
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 15
Consensus: krCCmCCyrCtGTGm
Weblogo: 
PSSM: P0      A      C      G      T
01    554   3074   4658   4438      k
02   7739   2117   4508      0      r
03   1210  12026      0    605      C
04   2023  11362    467    602      C
05   4965   6949    182   2538      m
06     48  12699     11      0      C
07   3655  11224     78     73      C
08    238   6119      0   6528      y
09   5904      0  10473      0      r
10     65   9301    295   3197      C
11   1144   2466   2629   6485      t
12    488      0  12453      0      G
13   2949   1363    424  11614      T
14     15   1596  11275   3332      G
15   3859   5413    770   2683      m
Binding TFs: ZIC4 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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