DNA Binding Motif

						

			
Accessions: M0644 (AthalianaCistrome v4_May2016)

			
Names: ANAC050.ampDAP, T16585;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: TaCTTGkrdarCAAG
Weblogo: 
PSSM: P0      A      C      G      T
01     97      0     93    407      T
02    235    108    114    140      a
03      1    595      0      1      C
04      0      0    115    482      T
05      0      0      0    597      T
06     20      0    577      0      G
07    128    145    154    170      k
08    198     75    273     51      r
09    151     78    177    191      d
10    236    106    112    143      a
11    285     38    171    103      r
12     17    418     98     64      C
13    597      0      0      0      A
14    477    120      0      0      A
15      1      0    595      1      G
Binding TFs: T16585 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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