DNA Binding Motif

						

			
Accessions: 4eot_AB (3D-footprint 20231221)

			
Names: Transcription factor MafA
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of the MafA homodimer bound to the consensus MARE
Length: 13
Consensus: tGCnnACTnnGCa
Weblogo: 
PSSM: P0      A      C      G      T
01     13     16     13     54      t
02      0      0     96      0      G
03      0     96      0      0      C
04     24     24     24     24      n
05     24     24     24     24      n
06     96      0      0      0      A
07      0     96      0      0      C
08      0      0      0     96      T
09     24     24     24     24      n
10     24     24     24     24      n
11      0      0     96      0      G
12      0     96      0      0      C
13     54     16     13     13      a
Type: Heterodimer
Binding TFs: 4eot_A (bZIP Maf transcription factor)
4eot_B (bZIP Maf transcription factor)
Binding Sites: 4eot_C
4eot_D
			
Publications: Lu X, Guanga G.P, Wan C, Rose R.B. A Novel DNA Binding Mechanism for maf Basic Region-Leucine Zipper Factors Inferred from a MafA-DNA Complex Structure and Binding Specificities. Biochemistry : (2012). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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