DNA Binding Motif

						

			
Accessions: M0420 (AthalianaCistrome v4_May2016)

			
Names: ATHB53.ampDAP, T21615;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: kymAATwATTGdtky
Weblogo: 
PSSM: P0      A      C      G      T
01    133    135    160    164      k
02    119    211     73    189      y
03    161    270     44    117      m
04    445     84      9     54      A
05    592      0      0      0      A
06      0      0      0    592      T
07    211     36     50    295      w
08    592      0      0      0      A
09      0      0      0    592      T
10      0      0      0    592      T
11     44      0    541      7      G
12    149     72    211    160      d
13    135     77     61    319      t
14     94    136    195    167      k
15    131    185    112    164      y
Binding TFs: T21615 (Homeobox domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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