DNA Binding Motif

						

			
Accessions: M0227 (AthalianaCistrome v4_May2016)

			
Names: T06028;, VIP1.ampDAP
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 14
Consensus: wdkmCAGCTGkCAw
Weblogo: 
PSSM: P0      A      C      G      T
01    105     50     91    167      w
02    117     42    143    111      d
03     94     70    108    141      k
04    232    114      0     67      m
05     20    311     40     42      C
06    399      0     14      0      A
07      5      4    404      0      G
08      0    405      0      8      C
09      0      0      0    413      T
10      0      0    413      0      G
11      0      4    199    210      k
12     55    351      0      7      C
13    307     20     45     41      A
14    143     87     42    141      w
Binding TFs: T06028 (bZIP transcription factor, Basic region leucine zipper)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.