DNA Binding Motif

						

			
Accessions: ZIC2_ChIP (humanC2H2ZF-ChIP Feb2015)

			
Names: ZIC2
Organisms: Homo sapiens
Libraries: humanC2H2ZF-ChIP Feb2015 1
1 Najafabadi HS, Mnaimneh S, Schmitges FW, Garton M, Lam KN, Yang A, Albu M, Weirauch MT, Radovani E, Kim PM, Greenblatt J, Frey BJ, Hughes TR. C2H2 zinc finger proteins greatly expand the human regulatory lexicon. Nat Biotechnol 33:555-62 (2015). [Pubmed]
Length: 11
Consensus: cyCCTGCtGrg
Weblogo: 
PSSM: P0      A      C      G      T
01 0.0517 0.5108 0.2198 0.2177      c
02 0.1078 0.3966 0.1573 0.3384      y
03 0.0280 0.8772 0.0948 0.0000      C
04 0.1487 0.7931 0.0022 0.0560      C
05 0.1444 0.1250 0.0280 0.7026      T
06 0.0000 0.0022 0.9978 0.0000      G
07 0.0000 0.8534 0.1466 0.0000      C
08 0.1767 0.0711 0.1056 0.6466      t
09 0.0000 0.0000 1.0000 0.0000      G
10 0.2823 0.1379 0.3319 0.2478      r
11 0.0000 0.1703 0.6573 0.1724      g
Binding TFs: ZIC2 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Najafabadi HS, Mnaimneh S, Schmitges FW, Garton M, Lam KN, Yang A, Albu M, Weirauch MT, Radovani E, Kim PM, Greenblatt J, Frey BJ, Hughes TR. C2H2 zinc finger proteins greatly expand the human regulatory lexicon. Nat Biotechnol 33:555-62 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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