DNA Binding Motif

Accessions: MA2040.2 (JASPAR 2024)
Names: ENAP2
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 9
Consensus: CTCCGGCGa
Weblogo:
PSSM: P0 A C G T
01 41 1863 43 351 C
02 160 13 328 1797 T
03 24 2244 15 15 C
04 7 2283 0 8 C
05 13 0 2281 4 G
06 105 119 2017 57 G
07 59 2038 10 191 C
08 128 68 2037 65 G
09 1363 208 428 299 a
Type: Heterodimer
Binding TFs: F4K0Q7 (Myb/SANT-like DNA-binding domain)
F4K0Q7
Binding Sites: MA2040.2.10 / MA2040.2.14 / MA2040.2.2 / MA2040.2.20 / MA2040.2.3 / MA2040.2.4
MA2040.2.18 / MA2040.2.19
MA2040.2.9
MA2040.2.5
MA2040.2.11 / MA2040.2.6
MA2040.2.1 / MA2040.2.16
MA2040.2.12
MA2040.2.13 / MA2040.2.15
MA2040.2.17
MA2040.2.7
MA2040.2.8
Publications: Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.