DNA Binding Motif
| Accessions: | MA0697.2 (JASPAR 2024) |
| Names: | Zic3 |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 13 |
| Consensus: | caCAGCAGGaggs |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 5354 13117 5154 2549 c 02 8488 6519 5935 5232 a 03 345 25035 460 334 C 04 23947 872 759 596 A 05 331 670 24907 266 G 06 354 24272 756 792 C 07 22980 568 1768 858 A 08 393 500 24314 967 G 09 347 955 24340 532 G 10 13124 4088 5733 3229 a 11 5162 3811 13952 3249 g 12 5660 6312 9238 4964 g 13 4533 8874 6825 5942 s |
| Type: | Heterodimer |
| Binding TFs: | Q62521 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) Q62521 |
| Binding Sites: | MA0697.2.1 MA0697.2.10 / MA0697.2.12 MA0697.2.11 MA0697.2.12 / MA0697.2.13 MA0697.2.13 / MA0697.2.15 MA0697.2.14 / MA0697.2.18 MA0697.2.15 / MA0697.2.19 MA0697.2.16 / MA0697.2.20 MA0697.2.17 MA0697.2.18 MA0697.2.19 MA0697.2.2 MA0697.2.20 MA0697.2.3 MA0697.2.4 MA0697.2.5 MA0697.2.6 MA0697.2.7 MA0697.2.8 MA0697.2.10 / MA0697.2.9 MA0697.2.11 MA0697.2.14 MA0697.2.16 MA0697.2.17 MA0697.2.9 |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.