DNA Binding Motif

						

			
Accessions: HSF5_methyl_1 (HT-SELEX2 May2017)

			
Names: HSF5
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 27
Consensus: yrGAAygytrvgrwccbyAACrTTCyr
Weblogo: 
PSSM: P0      A      C      G      T
01   1122  14856    573  17092      y
02  11888    154  19912      0      r
03      1      0  31948      0      G
04  31948      0   4543     56      A
05  31948      1    264    214      A
06      0  15391    141  16419      y
07   6548   3511  17432   4456      g
08   2120  12930   1806  15091      y
09   5217   6574   4679  15478      t
10   8994   6773  13201   2980      r
11   8163   8772   8040   6973      v
12   5325   7807  13094   5722      g
13   9060   5158  10183   7546      r
14   8915   7139   7704   8190      w
15   7643  11814   4937   7554      c
16   6988  12378   7867   4714      c
17   6004   9056   8043   8844      b
18   2531  15892   5372   8153      y
19  31948   2221   3667   2535      A
20  31948    468   2366    455      A
21   1285  31948   1787    936      C
22  20461     54  11487      2      r
23    239    546     10  31948      T
24      0     10      0  31948      T
25      0  31948      9      2      C
26      6  19964     88  11983      y
27  18771    806  13177   1257      r
Binding TFs: HSF5 (HSF-type DNA-binding)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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