DNA Binding Motif

						

			
Accessions: SRF_2 (HT-SELEX2 May2017)

			
Names: SRF
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: CCwTgTAwGG
Weblogo: 
PSSM: P0      A      C      G      T
01    169   2819     26     21      C
02      0   2819      0    284      C
03   1861     40    457    958      w
04    419     35      2   2819      T
05    894    664   2819    763      g
06    167     57      2   2819      T
07   2296      0    112    523      A
08    707    680    449    982      w
09    138      0   2819      0      G
10     27     66   2819    233      G
Binding TFs: SRF (SRF-type transcription factor (DNA-binding and dimerisation domain))
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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