DNA Binding Motif

Accessions: MA0353.1 (JASPAR 2024)
Names: PDR3
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-chip
Length: 8
Consensus: TCCGCGGA
Weblogo:
PSSM: P0 A C G T
01 0 0 0 203 T
02 0 203 0 0 C
03 0 203 0 0 C
04 0 0 203 0 G
05 0 203 0 0 C
06 0 0 203 0 G
07 0 0 203 0 G
08 203 0 0 0 A
Type: Heterodimer
Binding TFs: P33200 (Fungal Zn(2)-Cys(6) binuclear cluster domain, Fungal specific transcription factor domain )
P33200
Publications: MacIsaac K.D, Wang T, Gordon D.B, Gifford D.K, Stormo G.D, Fraenkel E. An improved map of conserved regulatory sites for Saccharomyces cerevisiae. BMC bioinformatics 7:113 (2006). [Pubmed]

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