DNA Binding Motif

						

			
Accessions: UN0370.1 (JASPAR 2024), MA2044.1 (JASPAR 2024)

			
Names: NAC007
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 11
Consensus: wwcAAGCAAym
Weblogo: 
PSSM: P0      A      C      G      T
01    613    525    325    710      w
02    721    368    473    611      w
03    285   1236    361    291      c
04   2117     13     19     24      A
05   1962    161     11     39      A
06      4      7   2144     18      G
07      3   2037      9    124      C
08   1974     60     40     99      A
09   2067     15     13     78      A
10    542    624    413    594      y
11    607    686    437    443      m
Type: Heterodimer
Binding TFs: Q9FWX2 (No apical meristem (NAM) protein)
Q9FWX2
Binding Sites: MA2044.1.3
MA2044.1.8 / UN0370.1.8
MA2044.1.4 / UN0370.1.4
MA2044.1.5 / UN0370.1.5
MA2044.1.6 / UN0370.1.6
MA2044.1.7 / UN0370.1.7
MA2044.1.1 / UN0370.1.1
MA2044.1.10 / UN0370.1.10
MA2044.1.11 / UN0370.1.11
MA2044.1.12 / UN0370.1.12
MA2044.1.13 / UN0370.1.13
MA2044.1.14 / UN0370.1.14
UN0370.1.15
MA2044.1.15 / UN0370.1.16
UN0370.1.17
MA2044.1.16 / UN0370.1.18
MA2044.1.17 / UN0370.1.19
MA2044.1.2 / UN0370.1.2
UN0370.1.20
UN0370.1.3
MA2044.1.9 / UN0370.1.9
MA2044.1.18
MA2044.1.19
MA2044.1.20
			
Publications: Zhong R, Lee C, Ye ZH. Global analysis of direct targets of secondary wall NAC master switches in Arabidopsis. Mol Plant 3:1087-103 (2010). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.