DNA Binding Motif

						

			
Accessions: M0858 (AthalianaCistrome v4_May2016)

			
Names: ATHB24.ampDAP, T07422;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: aawwrTAATTAAtww
Weblogo: 
PSSM: P0      A      C      G      T
01    400     48     28    124      a
02    354     53     47    146      a
03    295     53     47    205      w
04    236    111     82    171      w
05    240     39    200    121      r
06      6     14      0    580      T
07    496     10     94      0      A
08    592      0      8      0      A
09      0      0      0    600      T
10      0      0      0    600      T
11    597      0      2      1      A
12    451      0    134     15      A
13     67    101    136    296      t
14    182     69    123    226      w
15    340     38     62    160      w
Binding TFs: T07422 (ZF-HD protein dimerisation region)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.