DNA Binding Motif
| Accessions: | MA1245.2 (JASPAR 2024) |
| Names: | AT2G33710, ERF112 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 11 |
| Consensus: | dcCGCCGCCry |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 641 302 895 657 d 02 217 1507 361 410 c 03 168 2246 33 48 C 04 253 20 2173 49 G 05 1 2454 37 3 C 06 38 2449 1 7 C 07 219 3 2236 37 G 08 7 2446 14 28 C 09 38 2406 3 48 C 10 831 73 1264 327 r 11 304 1165 243 783 y |
| Type: | Heterodimer |
| Binding TFs: | P93007 (AP2 domain) P93007 |
| Binding Sites: | MA1245.2.11 / MA1245.2.19 MA1245.2.12 / MA1245.2.20 MA1245.2.14 MA1245.2.15 MA1245.2.16 MA1245.2.19 MA1245.2.20 MA1245.2.10 / MA1245.2.7 MA1245.2.4 / MA1245.2.8 MA1245.2.5 / MA1245.2.9 MA1245.2.15 / MA1245.2.9 MA1245.2.10 / MA1245.2.18 MA1245.2.1 MA1245.2.11 / MA1245.2.6 MA1245.2.12 MA1245.2.13 / MA1245.2.7 MA1245.2.14 / MA1245.2.8 MA1245.2.16 MA1245.2.17 MA1245.2.2 MA1245.2.2 / MA1245.2.3 MA1245.2.4 MA1245.2.5 MA1245.2.3 / MA1245.2.6 MA1245.2.17 MA1245.2.13 MA1245.2.18 |
| Publications: | Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.