DNA Binding Motif

						

			
Accessions: UN0383.1 (JASPAR 2024)

			
Names: Nanog
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 11
Consensus: waACAATGgaa
Weblogo: 
PSSM: P0      A      C      G      T
01   7464   2510   5460   8103      w
02   8820   4286   5463   4968      a
03  23025     91    111    310      A
04    235  21423    441   1438      C
05  22416    241    199    681      A
06  22746    215    361    215      A
07    919    246    157  22215      T
08   4109    277  18740    411      G
09   3762   2440  15295   2040      g
10   8204   5787   4654   4892      a
11   7147   5589   4934   5867      a
Type: Heterodimer
Binding TFs: Q80Z64 (Homeobox domain, Homeodomain leucine-zipper encoding, Homez)
Q80Z64
Binding Sites: UN0383.1.13
UN0383.1.1
UN0383.1.10
UN0383.1.11
UN0383.1.12
UN0383.1.14
UN0383.1.15
UN0383.1.16
UN0383.1.17
UN0383.1.18
UN0383.1.19
UN0383.1.2
UN0383.1.20
UN0383.1.3
UN0383.1.4
UN0383.1.5
UN0383.1.6
UN0383.1.7
UN0383.1.8
UN0383.1.9
			
	
			


			

				

				
				
				
				

			

			

		

	
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