DNA Binding Motif

						

			
Accessions: M0651 (AthalianaCistrome v4_May2016)

			
Names: NAC2.DAP, T23018;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 17
Consensus: CTTGttsyrCAAGaAAc
Weblogo: 
PSSM: P0      A      C      G      T
01      6    592      1      0      C
02      0      0     92    507      T
03      0      0      0    599      T
04     50     65    471     13      G
05     57    130     39    373      t
06     82     93    136    288      t
07    101    195    157    146      s
08    124    217     79    179      y
09    202    123    154    120      r
10      0    591      2      6      C
11    599      0      0      0      A
12    562     36      1      0      A
13      0      0    599      0      G
14    386     72     30    111      a
15    483     59      0     57      A
16    588      0      0     11      A
17    102    315     59    123      c
Binding TFs: T23018 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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