DNA Binding Motif

						

			
Accessions: M0440 (AthalianaCistrome v4_May2016)

			
Names: ATHB6.ampDAP, T10012;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 11
Consensus: tCAATAATTga
Weblogo: 
PSSM: P0      A      C      G      T
01    127    139    109    202      t
02     21    436      0    120      C
03    577      0      0      0      A
04    577      0      0      0      A
05      0      0      0    577      T
06    434    140      0      3      A
07    577      0      0      0      A
08      0      0      0    577      T
09     31      0     31    515      T
10    139     59    345     34      g
11    292     74     81    130      a
Binding TFs: T10012 (Homeobox domain, Homeobox associated leucine zipper)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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