DNA Binding Motif

						

			
Accessions: HOXA13_7 (HT-SELEX2 May2017)

			
Names: HOXA13
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: sCTCGTAAAah
Weblogo: 
PSSM: P0      A      C      G      T
01    698   1325   1888   1232      s
02    220   5142    205     26      C
03     53     67     46   5142      T
04     69   5142      0    343      C
05    689      0   5142      2      G
06      0     14      0   5142      T
07   5142      0     20    642      A
08   5142      0      1     40      A
09   5142     54     13     25      A
10   5142   1044    404   1658      a
11   1364   1702    560   1517      h
Binding TFs: HOXA13 (Homeobox domain, Hox protein A13 N terminal)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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